The Do's and Don'ts for Screening Process Factors

Stat-Ease Team on June 22, 2026

Adapted from Mark Anderson's 2023 webinar, "Do's & Don'ts for Screening Process Factors."


Over the years working with process development engineers on scale-up and manufacturing troubleshooting, we've noticed a pattern: the factors that experts think drive their process are rarely the whole story. There are often other variables at play that nobody anticipates. The best way to uncover these is by using screening designs: broad, shallow experiments that help you uncover previously unknown factors. Done right, a well-designed screening study can transform your understanding of a process and point you directly to the vital few factors worth exploring in depth.

First, let’s make sure we understand what a screening design does in the overall arc of process optimization. Screening designs exist to help ensure we are working with the right factors in subsequent optimization studies. Figure 1 explains the overall strategy. Note that interactions – often the key to process improvement – are not identified until the subsequent step. But a good screening design can shed some light on whether or not there are interactions to further pursue.


SCOR diagram with 'Unknown Factors' leading to 'Screening' highlighted.

Fig. 1: Where screening fits in the SCOR strategy of experimentation.

With this strategy in view, here are the core do's and don'ts on screening designs. Consider this your field guide for avoiding the most common (and costly) mistakes.

DON'T: Include Factors You Already Know Will Affect the Process

This one surprises a lot of people, and has been the topic of heated discussions within our team. Why would you exclude a known important factor?

The answer is strategic focus and efficiency. By setting known factors aside during screening, you can concentrate on previously unknown factors: ones that might derail your process in unexpected ways. A broad and shallow two-level screening design lets you quickly identify the "vital few" from the "trivial many." In our experience, roughly 20% of factors you didn't expect to matter, matter! The known factors can be merged back in during the next phase of experimentation.

DON'T: Use Low Resolution Designs for Screening

This is our biggest pet peeve. Two types of designs fall into this trap: regular fractional factorials at Resolution III (shown as "red" designs in Stat-Ease software[MA3.1]), which alias main effects directly with two-factor interactions, and Plackett-Burman designs with even worse aliasing. That's a fatal flaw for screening, because if any factors interact (and in real processes, they often do) your main effect estimates are corrupted. You simply cannot trust what the analysis is telling you.


Screenshot of the factorial design picker in Stat-Ease software.

Fig. 2: Stat-Ease software's design picker, color-coded for your convenience.

We're particularly troubled by how often Plackett-Burman designs get recommended for screening. Even the NIST Engineering Statistics Handbook suggests using them, while simultaneously noting that “main effects are in general heavily confounded with two-factor interactions.” To us, that's an oxymoron. If main effects are confounded with two-factor interactions, how exactly is this a screening design? You can’t screen anything out!

To illustrate the danger, we ran a simulation using the classic filtration rate dataset from Doug Montgomery's textbook Design and Analysis of Experiments. The full factorial result was clear: factors A (temperature), C (concentration), and D (stirring rate) were significant, along with strong AC and AD interactions.


Half-normal plot of the filtration rate experiment done as a full factorial. Factors A, C, and D are selected, as well as interactions AC and AD.

Fig. 3: Half-normal plot of effects for the full factorial design. Note that the selected effects are to well the right of the guideline.

When we re-ran the same underlying model through a 12-run Plackett-Burman simulation, the results were alarming. The AC and AD interactions got “smeared out” across multiple dummy factors. In particular, a fake factor E appeared significant when it was actually picking up aliased pieces of AC and AD. Meanwhile, the real main effect of D was undercut by its aliasing with one-third of AC, causing a cancellation. The result? Only factor A was correctly identified. Factors C and D were missed entirely.


Half-normal plot of the filtration rate experiment done as a Plackett-Burman. Factors A, C, and E (a fake) are selected.

Fig. 4: Half-normal plot of effects for the Plackett-Burman design. None of the effects are to the right of the line, meaning this experiment shows no significant factors or interactions.

DOE pioneer George Box once said that running Resolution III or PB designs are "like kicking the TV to make it work." Sometimes you're desperate enough to try it, but there’s no guarantee you’ll get a usable result.

A Case Study in What NOT to Do

One of our users, a pharmaceutical process developer, sent in his design results hoping we could help salvage them. He had seven factors (time, temperature, and related process variables) and chose a Resolution III design with seven factors in eight runs. This is known as a ‘saturated’ design—the most factors that can be crammed into a given number of runs in a regular fractional factorial. Then, apparently recognizing the power would be low, he replicated the design, giving him 16 runs total, still at Resolution III.

As Ronald Fisher put it, a statistician is more like a pathologist than a medical doctor. We can tell you what killed the patient, but we can't bring it back to life. We wish this researcher had contacted us before running the design. The 16-run Resolution IV option for seven factors was right there in the software, highlighted in yellow (indicating a design more suitable for screening) It would have given him both the power and the resolution he needed. Instead, he replicated a bad design, which is a bit like making a photocopy of a photocopy.

The power calculations for these two designs are the clincher. One replicate of eight runs gave only 50% power to detect his specified signal-to-noise ratio of 1.67. Two replicates (still Resolution III) pushed that to about 87%: good power, terrible resolution. The unreplicated Resolution IV design in 16 runs also reached about 83% power, while giving him a design that could actually distinguish main effects from interactions.

DO: Start with a Resolution IV Design

As stated above, Resolution IV is the “Goldilocks” choice for screening. Main effects are aliased only with three-factor interactions, which are rarely active. That means that any significant main effects detected are almost certainly real. While two-factor interactions in a Res IV design may be murky, you'll know to investigate these further.

In Stat-Ease software, these are the yellow designs in the Regular Two-Level design builder. For up to eight factors, these medium resolution designs work beautifully. For nine or more factors, Stat-Ease’s proprietary, optimally templated, Minimum-Run screening design provides an excellent option when the standard design alternatives get too big.


Screenshot from Stat-Ease software showing the Min-Run Screening design option.

Fig. 5: Min-Run Screening designs in Stat-Ease software. Choose them from the sidebar on the left.

Summary: The Screening Do's and Don'ts

To recap: hold known factors aside during screening and focus on the unknowns. Known factors will be studied together with the survivors of the screening design in the next round of experimentation when characterizing two-factor interactions with high-resolution designs. Avoid low-resolution designs: the red standard ones or Plackett-Burmans. Instead, go with medium Resolution IV or minimum run screening design from the start.

All Stat-Ease software licensees have access to our DOE experts. We encourage you to contact us before making a big mistake in your design of experiments. Don’t hesitate to reach out: do your screening right the first time.


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